BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024E04LP1|AL428224
(1175 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1299 1808 0.0
>3x_Contig1299
Length = 7525
Score = 1808 bits (911), Expect = 0.0
Identities = 914/915 (99%)
Strand = Plus / Plus
Query: 1 atctaagaaaggctataactctgctccaatctgcagctaagatcgtgttgcagaacgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1745 atctaagaaaggctataactctgctccaatctgcagctaagatcgtgttgcagaacgatg 1804
Query: 61 atgcgaatactattactttgaagcatgctaatgaattatcggggacgattcatgaagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1805 atgcgaatactattactttgaagcatgctaatgaattatcggggacgattcatgaagaga 1864
Query: 121 tactacaggatctaatcaacgtaataaaaggaaaagatctcaacaagattattgataagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1865 tactacaggatctaatcaacgtaataaaaggaaaagatctcaacaagattattgataagg 1924
Query: 181 tacaggaatttgttaaccagggatggagtgcagcttcagcattgacccaattgcatgagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1925 tacaggaatttgttaaccagggatggagtgcagcttcagcattgacccaattgcatgagt 1984
Query: 241 attacatcaagaatgaaagctacgatacagagtttaagaataaggtatcttggctacttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1985 attacatcaagaatgaaagctacgatacagagtttaagaataaggtatcttggctacttt 2044
Query: 301 tcgatagcgattccaagttaaccaacggagctagcgagcatcttcaaatgttgaacctag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2045 tcgatagcgattccaagttaaccaacggagctagcgagcatcttcaaatgttgaacctag 2104
Query: 361 caatgaaggtatctcaattatataactagttagatgagtaattagatcaatgaatgcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2105 caatgaaggtatctcaattatataactagttagatgagtaattagatcaatgaatgcaaa 2164
Query: 421 gaaaagtatcgatttacttgctacttatttagatgtaattgcgttattggcgcggatttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2165 gaaaagtatcgatttacttgctacttatttagatgtaattgcgttattggcgcggatttg 2224
Query: 481 tttggcgcggttgctgcgggtgttgttgttgctgcgggtattgttgttgctgctgctgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2225 tttggcgcggttgctgcgggtgttgttgttgctgcgggtattgttgttgctgctgctgct 2284
Query: 541 gttgttgttgttgaaactgtagagccatcattggatggccatatgggaatgcatttggtg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2285 gttgttgttgttgaaactgtagagccatcattggatggccatatgggaatgcatttggtg 2344
Query: 601 ggataccttgagctggaattggaacattttgcccattgaagttcattggcatacctgaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2345 ggataccttgagctggaattggaacattttgcccattgaagttcattggcatacctgaca 2404
Query: 661 tcatataaggttgttgtgggtgggattgaggatggccttgtgaaggaacttgaccttgcg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2405 tcatataaggttgttgtgggtgggattgaggatggccttgtgaaggaacttgaccttgcg 2464
Query: 721 gaccaactttacttgctggctgttttggagcgctaggaggctgctgttgtgggttaccca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2465 gaccaactttacttgctggctgttttggagcgctaggaggctgctgttgtgggttaccca 2524
Query: 781 agtgttcggggaatcctttaccgttgctcattatacgtggctgtcccattccaggtggcg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2525 agtgttcggggaatcctttaccgttgctcattatacgtggctgtcccattccaggtggcg 2584
Query: 841 gtggaggaggcatagcatagccaccttggaagtgctgtggaggcattcccataggagggg 900
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2585 gtggaggaggcatagcatagccaccttggaagtgctgtggaggaattcccataggagggg 2644
Query: 901 ccatcatatgtggtg 915
|||||||||||||||
Sbjct: 2645 ccatcatatgtggtg 2659
Score = 417 bits (210), Expect = e-116
Identities = 229/234 (97%), Gaps = 2/234 (0%)
Strand = Plus / Plus
Query: 941 tgcctgcattggagcacct-gattgagcaatgttttgtggtggtt-accatgtagctgct 998
||||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 2685 tgcctgcattggagcacctcgattgagcaatgttttgtggtggtttaccatgttgctgct 2744
Query: 999 gctgagcaggatgagcatgctggctgtgttgttgatgaatttgttgaagtttgcgttgtt 1058
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2745 gctgagcaggatgagcatgctggctgtgttgttgatgaatttgttgaagtttgcgttgtt 2804
Query: 1059 gaggttgctgctgctgctgttgatgtgggcgctgaatgtgttgctgttgtwgctgttgtt 1118
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2805 gaggttgctgctgctgctgttgatgtgggcgctgaatgtgttgctgttgttgctgttgtt 2864
Query: 1119 gctgttgctgatgctgctgctgctgctgctgctgctgctgctgctgtgtgawgt 1172
||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 2865 gctgttgctgatgctgctgctgctgctgctgctgctgctgctgctgtgtgatgt 2918
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,766
Number of Sequences: 1807
Number of extensions: 12766
Number of successful extensions: 1445
Number of sequences better than 1.0e-20: 1
length of query: 1175
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1159
effective length of database: 10,329,639
effective search space: 11972051601
effective search space used: 11972051601
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 51 (101.7 bits)